Cluster: HRGMv2_3695_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3695
- CGC Family ID: CGCFAM_00036
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3695_13 | HRGMv2_3695_13_18 | 20748 | 21644 | - | GT2 |
| TC | HRGMv2_3695_13 | HRGMv2_3695_13_19 | 21655 | 22392 | - | 3.A.1.103.1 |
| TC | HRGMv2_3695_13 | HRGMv2_3695_13_20 | 22417 | 23196 | - | 3.A.1.103.1 |
| CAZyme | HRGMv2_3695_13 | HRGMv2_3695_13_21 | 23224 | 23994 | - | GT111 |
| pfam | HRGMv2_3695_13 | HRGMv2_3695_13_22 | 23995 | 25098 | - | Amino_oxidase | GLF | NAD_binding_8 |
| TC | HRGMv2_3695_13 | HRGMv2_3695_13_23 | 25149 | 26588 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_3695_13_18
Type: CAZyme
Location: 20748 - 21644 (-)
Type: CAZyme
Location: 20748 - 21644 (-)
Gene ID: HRGMv2_3695_13_19
Type: TC
Location: 21655 - 22392 (-)
Type: TC
Location: 21655 - 22392 (-)
Gene ID: HRGMv2_3695_13_20
Type: TC
Location: 22417 - 23196 (-)
Type: TC
Location: 22417 - 23196 (-)
Gene ID: HRGMv2_3695_13_21
Type: CAZyme
Location: 23224 - 23994 (-)
Type: CAZyme
Location: 23224 - 23994 (-)
Gene ID: HRGMv2_3695_13_22
Type: pfam
Location: 23995 - 25098 (-)
Type: pfam
Location: 23995 - 25098 (-)
Gene ID: HRGMv2_3695_13_23
Type: TC
Location: 25149 - 26588 (-)
Type: TC
Location: 25149 - 26588 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp000431435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.