Cluster: HRGMv2_3695_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3695
- CGC Family ID: CGCFAM_00329
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3695_9 | HRGMv2_3695_9_4 | 6330 | 7910 | + | 2.A.66.2.14 |
| pfam | HRGMv2_3695_9 | HRGMv2_3695_9_5 | 7962 | 9188 | + | MazG | MazG |
| pfam | HRGMv2_3695_9 | HRGMv2_3695_9_6 | 9260 | 9562 | + | Bac_DNA_binding | HU-HIG |
| CAZyme | HRGMv2_3695_9 | HRGMv2_3695_9_7 | 9731 | 10903 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_3695_9 | HRGMv2_3695_9_8 | 10970 | 11299 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3695_9 | HRGMv2_3695_9_9 | 11478 | 12224 | - | DUF4198 |
| TC | HRGMv2_3695_9 | HRGMv2_3695_9_10 | 12522 | 14510 | + | 3.A.1.120.6 |
Gene ID: HRGMv2_3695_9_4
Type: TC
Location: 6330 - 7910 (+)
Type: TC
Location: 6330 - 7910 (+)
Gene ID: HRGMv2_3695_9_5
Type: pfam
Location: 7962 - 9188 (+)
Type: pfam
Location: 7962 - 9188 (+)
Gene ID: HRGMv2_3695_9_6
Type: pfam
Location: 9260 - 9562 (+)
Type: pfam
Location: 9260 - 9562 (+)
Gene ID: HRGMv2_3695_9_7
Type: CAZyme
Location: 9731 - 10903 (+)
Type: CAZyme
Location: 9731 - 10903 (+)
Gene ID: HRGMv2_3695_9_8
Type:
Location: 10970 - 11299 (+)
Type:
Location: 10970 - 11299 (+)
Gene ID: HRGMv2_3695_9_9
Type: pfam
Location: 11478 - 12224 (-)
Type: pfam
Location: 11478 - 12224 (-)
Gene ID: HRGMv2_3695_9_10
Type: TC
Location: 12522 - 14510 (+)
Type: TC
Location: 12522 - 14510 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp000431435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.