Cluster: HRGMv2_3695_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3695
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3695_3 | HRGMv2_3695_3_97 | 104149 | 105111 | + | 9.B.146.1.6 |
| pfam | HRGMv2_3695_3 | HRGMv2_3695_3_98 | 105124 | 106506 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_3695_3 | HRGMv2_3695_3_99 | 106509 | 107615 | + | GT28 |
Gene ID: HRGMv2_3695_3_97
Type: TC
Location: 104149 - 105111 (+)
Type: TC
Location: 104149 - 105111 (+)
Gene ID: HRGMv2_3695_3_98
Type: pfam
Location: 105124 - 106506 (+)
Type: pfam
Location: 105124 - 106506 (+)
Gene ID: HRGMv2_3695_3_99
Type: CAZyme
Location: 106509 - 107615 (+)
Type: CAZyme
Location: 106509 - 107615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp000431435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.