Cluster: HRGMv2_3695_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3695
- CGC Family ID: CGCFAM_08728
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3695_3 | HRGMv2_3695_3_3 | 1647 | 3332 | + | GH2 |
| pfam | HRGMv2_3695_3 | HRGMv2_3695_3_4 | 3439 | 4578 | - | RVT_1 |
| TC | HRGMv2_3695_3 | HRGMv2_3695_3_5 | 5282 | 6541 | - | 9.B.67.4.3 |
| TC | HRGMv2_3695_3 | HRGMv2_3695_3_6 | 6541 | 8109 | - | 2.A.66.2.14 |
Gene ID: HRGMv2_3695_3_3
Type: CAZyme
Location: 1647 - 3332 (+)
Type: CAZyme
Location: 1647 - 3332 (+)
Gene ID: HRGMv2_3695_3_4
Type: pfam
Location: 3439 - 4578 (-)
Type: pfam
Location: 3439 - 4578 (-)
Gene ID: HRGMv2_3695_3_5
Type: TC
Location: 5282 - 6541 (-)
Type: TC
Location: 5282 - 6541 (-)
Gene ID: HRGMv2_3695_3_6
Type: TC
Location: 6541 - 8109 (-)
Type: TC
Location: 6541 - 8109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp000431435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.