Cluster: HRGMv2_3695_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3695
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3695_38 | HRGMv2_3695_38_1 | 299 | 1621 | - | 2.A.1.82.4 |
| TF | HRGMv2_3695_38 | HRGMv2_3695_38_2 | 1774 | 2394 | - | HTH_11 |
| pfam | HRGMv2_3695_38 | HRGMv2_3695_38_3 | 2876 | 4165 | + | Adenylsucc_synt |
| TC | HRGMv2_3695_38 | HRGMv2_3695_38_4 | 4480 | 5202 | + | 9.B.27.2.5 |
| CAZyme | HRGMv2_3695_38 | HRGMv2_3695_38_5 | 5214 | 6929 | + | GT83 |
Gene ID: HRGMv2_3695_38_1
Type: TC
Location: 299 - 1621 (-)
Type: TC
Location: 299 - 1621 (-)
Gene ID: HRGMv2_3695_38_2
Type: TF
Location: 1774 - 2394 (-)
Type: TF
Location: 1774 - 2394 (-)
Gene ID: HRGMv2_3695_38_3
Type: pfam
Location: 2876 - 4165 (+)
Type: pfam
Location: 2876 - 4165 (+)
Gene ID: HRGMv2_3695_38_4
Type: TC
Location: 4480 - 5202 (+)
Type: TC
Location: 4480 - 5202 (+)
Gene ID: HRGMv2_3695_38_5
Type: CAZyme
Location: 5214 - 6929 (+)
Type: CAZyme
Location: 5214 - 6929 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella_A
Species
Veillonella_A sp000431435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.