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Cluster: HRGMv2_3691_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3691_21 HRGMv2_3691_21_4 5920 7356 + 9.B.18.1.2
STP HRGMv2_3691_21 HRGMv2_3691_21_5 7504 8631 + Pyr_redox
CAZyme HRGMv2_3691_21 HRGMv2_3691_21_6 9194 9961 + GT111
NULL(UNKNOWN) HRGMv2_3691_21 HRGMv2_3691_21_7 10055 11113 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3691_21 HRGMv2_3691_21_8 11194 13077 + Hydrolase | Hydrolase_like
CAZyme HRGMv2_3691_21 HRGMv2_3691_21_9 13178 14299 + GT4
pfam HRGMv2_3691_21 HRGMv2_3691_21_10 14296 15798 + Wzy_C
CAZyme HRGMv2_3691_21 HRGMv2_3691_21_11 15783 16757 + GT2
TC HRGMv2_3691_21 HRGMv2_3691_21_12 16763 18013 + 2.A.66.2.10
Gene ID: HRGMv2_3691_21_4
Type: TC
Location: 5920 - 7356 (+)
Gene ID: HRGMv2_3691_21_5
Type: STP
Location: 7504 - 8631 (+)
Gene ID: HRGMv2_3691_21_6
Type: CAZyme
Location: 9194 - 9961 (+)
Gene ID: HRGMv2_3691_21_7
Type:
Location: 10055 - 11113 (+)
Gene ID: HRGMv2_3691_21_8
Type: pfam
Location: 11194 - 13077 (+)
Gene ID: HRGMv2_3691_21_9
Type: CAZyme
Location: 13178 - 14299 (+)
Gene ID: HRGMv2_3691_21_10
Type: pfam
Location: 14296 - 15798 (+)
Gene ID: HRGMv2_3691_21_11
Type: CAZyme
Location: 15783 - 16757 (+)
Gene ID: HRGMv2_3691_21_12
Type: TC
Location: 16763 - 18013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3691_21_4 vegan > omnivore 1.48610 0.00224
HRGMv2_3691_21_4 vegetarian > omnivore 2.18642 0.00082

🧭 Explore Read Mapping of CGC

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