Cluster: HRGMv2_3691_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3691
- CGC Family ID: CGCFAM_00245
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3691_18 | HRGMv2_3691_18_23 | 25837 | 26520 | + | GT2 |
| pfam | HRGMv2_3691_18 | HRGMv2_3691_18_24 | 26532 | 27932 | + | DUF6056 |
| pfam | HRGMv2_3691_18 | HRGMv2_3691_18_25 | 28192 | 28377 | + | Ribosomal_L32p |
| TC | HRGMv2_3691_18 | HRGMv2_3691_18_26 | 29475 | 30467 | + | 3.A.1.34.1 |
| pfam | HRGMv2_3691_18 | HRGMv2_3691_18_27 | 30594 | 31601 | + | ABC_sub_bind |
| TC | HRGMv2_3691_18 | HRGMv2_3691_18_28 | 31634 | 32515 | + | 3.A.1.34.1 |
| TC | HRGMv2_3691_18 | HRGMv2_3691_18_29 | 32518 | 33306 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_3691_18_23
Type: CAZyme
Location: 25837 - 26520 (+)
Type: CAZyme
Location: 25837 - 26520 (+)
Gene ID: HRGMv2_3691_18_24
Type: pfam
Location: 26532 - 27932 (+)
Type: pfam
Location: 26532 - 27932 (+)
Gene ID: HRGMv2_3691_18_25
Type: pfam
Location: 28192 - 28377 (+)
Type: pfam
Location: 28192 - 28377 (+)
Gene ID: HRGMv2_3691_18_26
Type: TC
Location: 29475 - 30467 (+)
Type: TC
Location: 29475 - 30467 (+)
Gene ID: HRGMv2_3691_18_27
Type: pfam
Location: 30594 - 31601 (+)
Type: pfam
Location: 30594 - 31601 (+)
Gene ID: HRGMv2_3691_18_28
Type: TC
Location: 31634 - 32515 (+)
Type: TC
Location: 31634 - 32515 (+)
Gene ID: HRGMv2_3691_18_29
Type: TC
Location: 32518 - 33306 (+)
Type: TC
Location: 32518 - 33306 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister sp002320515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3691_18_27 | vegan > omnivore | 18.42470 | 0.00224 |
| HRGMv2_3691_18_27 | vegetarian > omnivore | 19.65431 | 0.00082 |
| HRGMv2_3691_18_27 | vegetarian > vegan | 1.22961 | 0.02034 |
| HRGMv2_3691_18_28 | vegan > omnivore | 20.23257 | 0.00224 |
| HRGMv2_3691_18_28 | vegetarian > omnivore | 21.62318 | 0.00082 |
| HRGMv2_3691_18_28 | vegetarian > vegan | 1.39061 | 0.02034 |