dbCAN HGM

Cluster: HRGMv2_3691_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3691_7	HRGMv2_3691_7_22	26302	29730	+	3.B.1.1.1
TC	HRGMv2_3691_7	HRGMv2_3691_7_23	30034	31293	+	2.A.23.4.1
pfam	HRGMv2_3691_7	HRGMv2_3691_7_24	31734	32558	+	LpxI_C \| LpxI_N
CAZyme	HRGMv2_3691_7	HRGMv2_3691_7_25	32555	33694	+	GT19
TC	HRGMv2_3691_7	HRGMv2_3691_7_26	33684	35468	+	3.A.1.106.1
CAZyme	HRGMv2_3691_7	HRGMv2_3691_7_27	35601	36929	+	GT30

Gene ID: HRGMv2_3691_7_22
Type: TC
Location: 26302 - 29730 (+)

Gene ID: HRGMv2_3691_7_23
Type: TC
Location: 30034 - 31293 (+)

Gene ID: HRGMv2_3691_7_24
Type: pfam
Location: 31734 - 32558 (+)

Gene ID: HRGMv2_3691_7_25
Type: CAZyme
Location: 32555 - 33694 (+)

Gene ID: HRGMv2_3691_7_26
Type: TC
Location: 33684 - 35468 (+)

Gene ID: HRGMv2_3691_7_27
Type: CAZyme
Location: 35601 - 36929 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3691_7_23	vegetarian > vegan	1.70562	0.02034
HRGMv2_3691_7_24	vegetarian > vegan	1.58323	0.02034
HRGMv2_3691_7_25	vegan > omnivore	5.36599	0.00224
HRGMv2_3691_7_25	vegetarian > omnivore	5.56125	0.00082
HRGMv2_3691_7_26	vegetarian > vegan	1.09115	0.02034
HRGMv2_3691_7_27	vegan > omnivore	1.29298	0.00224
HRGMv2_3691_7_27	vegetarian > omnivore	2.15987	0.00082