dbCAN HGM

Cluster: HRGMv2_3690_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3690_1	HRGMv2_3690_1_1953	2360166	2363594	+	3.B.1.1.1
pfam	HRGMv2_3690_1	HRGMv2_3690_1_1954	2363841	2365304	+	UPF0236
TC	HRGMv2_3690_1	HRGMv2_3690_1_1955	2365567	2366826	+	2.A.23.4.1
pfam	HRGMv2_3690_1	HRGMv2_3690_1_1956	2367321	2368145	+	LpxI_C \| LpxI_N
CAZyme	HRGMv2_3690_1	HRGMv2_3690_1_1957	2368142	2369281	+	GT19
TC	HRGMv2_3690_1	HRGMv2_3690_1_1958	2369271	2371055	+	3.A.1.106.1
CAZyme	HRGMv2_3690_1	HRGMv2_3690_1_1959	2371185	2372507	+	GT30

Gene ID: HRGMv2_3690_1_1953
Type: TC
Location: 2360166 - 2363594 (+)

Gene ID: HRGMv2_3690_1_1954
Type: pfam
Location: 2363841 - 2365304 (+)

Gene ID: HRGMv2_3690_1_1955
Type: TC
Location: 2365567 - 2366826 (+)

Gene ID: HRGMv2_3690_1_1956
Type: pfam
Location: 2367321 - 2368145 (+)

Gene ID: HRGMv2_3690_1_1957
Type: CAZyme
Location: 2368142 - 2369281 (+)

Gene ID: HRGMv2_3690_1_1958
Type: TC
Location: 2369271 - 2371055 (+)

Gene ID: HRGMv2_3690_1_1959
Type: CAZyme
Location: 2371185 - 2372507 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3690_1_1954	vegan > omnivore	19.03414	0.01271
HRGMv2_3690_1_1954	vegetarian > omnivore	18.08381	0.00565
HRGMv2_3690_1_1957	vegan > omnivore	1.72819	0.01271
HRGMv2_3690_1_1957	vegetarian > omnivore	2.29590	0.00565