Cluster: HRGMv2_3690_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3690
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_1487 | 1784787 | 1785614 | + | CE11 |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_1488 | 1785651 | 1786130 | + | FabA |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_1489 | 1786333 | 1787145 | + | Hexapep | Hexapep | Acetyltransf_11 |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_1490 | 1788652 | 1789977 | + | 2.A.26.1.9 |
Gene ID: HRGMv2_3690_1_1487
Type: CAZyme
Location: 1784787 - 1785614 (+)
Type: CAZyme
Location: 1784787 - 1785614 (+)
Gene ID: HRGMv2_3690_1_1488
Type: pfam
Location: 1785651 - 1786130 (+)
Type: pfam
Location: 1785651 - 1786130 (+)
Gene ID: HRGMv2_3690_1_1489
Type: pfam
Location: 1786333 - 1787145 (+)
Type: pfam
Location: 1786333 - 1787145 (+)
Gene ID: HRGMv2_3690_1_1490
Type: TC
Location: 1788652 - 1789977 (+)
Type: TC
Location: 1788652 - 1789977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister succinatiphilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3690_1_1487 | vegan > omnivore | 3.37821 | 0.01271 |
| HRGMv2_3690_1_1487 | vegetarian > omnivore | 3.65740 | 0.00565 |
| HRGMv2_3690_1_1488 | vegetarian > vegan | 1.22876 | 0.00565 |
| HRGMv2_3690_1_1490 | vegan > omnivore | 1.87306 | 0.01271 |
| HRGMv2_3690_1_1490 | vegetarian > omnivore | 1.52733 | 0.00565 |