Cluster: HRGMv2_3690_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3690
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_662 | 771343 | 772725 | - | GH18 |
| NULL(UNKNOWN) | HRGMv2_3690_1 | HRGMv2_3690_1_663 | 772741 | 773931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_664 | 773951 | 774601 | - | 3.A.11.1.4 |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_665 | 774598 | 776730 | - | 3.A.7.16.1 |
Gene ID: HRGMv2_3690_1_662
Type: CAZyme
Location: 771343 - 772725 (-)
Type: CAZyme
Location: 771343 - 772725 (-)
Gene ID: HRGMv2_3690_1_663
Type:
Location: 772741 - 773931 (-)
Type:
Location: 772741 - 773931 (-)
Gene ID: HRGMv2_3690_1_664
Type: TC
Location: 773951 - 774601 (-)
Type: TC
Location: 773951 - 774601 (-)
Gene ID: HRGMv2_3690_1_665
Type: TC
Location: 774598 - 776730 (-)
Type: TC
Location: 774598 - 776730 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister succinatiphilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3690_1_662 | vegan > omnivore | 16.75547 | 0.01271 |
| HRGMv2_3690_1_662 | vegetarian > omnivore | 18.88019 | 0.00565 |
| HRGMv2_3690_1_662 | vegetarian > vegan | 2.12472 | 0.00565 |
| HRGMv2_3690_1_663 | vegan > omnivore | 2.01062 | 0.01271 |
| HRGMv2_3690_1_663 | vegetarian > omnivore | 4.81692 | 0.00565 |
| HRGMv2_3690_1_663 | vegetarian > vegan | 2.80629 | 0.00565 |
| HRGMv2_3690_1_664 | vegan > omnivore | 16.59862 | 0.01271 |
| HRGMv2_3690_1_664 | vegetarian > omnivore | 18.61604 | 0.00565 |
| HRGMv2_3690_1_664 | vegetarian > vegan | 2.01742 | 0.00565 |
| HRGMv2_3690_1_665 | vegan > omnivore | 1.86651 | 0.01271 |
| HRGMv2_3690_1_665 | vegetarian > omnivore | 1.62378 | 0.00565 |