Cluster: HRGMv2_3690_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3690
- CGC Family ID: CGCFAM_00300
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_2028 | 2448038 | 2449768 | - | 9.B.34.1.4 |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_2029 | 2450134 | 2450877 | + | Pyr_redox_dim | Pyr_redox_2 |
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_2030 | 2451306 | 2452247 | + | GT2 |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_2031 | 2452311 | 2452727 | + | GtrA_DPMS_TM |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_2032 | 2452896 | 2453576 | - | UDG |
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_2033 | 2453590 | 2455341 | - | GT83 |
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_2034 | 2455359 | 2456948 | - | GT83 |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_2035 | 2456945 | 2457532 | - | 9.B.27.2.5 |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_2036 | 2458059 | 2458859 | + | 3.A.1.3.2 |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_2037 | 2459044 | 2459859 | + | 3.A.1.3.17 |
| NULL(UNKNOWN) | HRGMv2_3690_1 | HRGMv2_3690_1_2038 | 2459967 | 2460203 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_2039 | 2460683 | 2461426 | + | 3.A.1.5.23 |
Gene ID: HRGMv2_3690_1_2028
Type: TC
Location: 2448038 - 2449768 (-)
Type: TC
Location: 2448038 - 2449768 (-)
Gene ID: HRGMv2_3690_1_2029
Type: pfam
Location: 2450134 - 2450877 (+)
Type: pfam
Location: 2450134 - 2450877 (+)
Gene ID: HRGMv2_3690_1_2030
Type: CAZyme
Location: 2451306 - 2452247 (+)
Type: CAZyme
Location: 2451306 - 2452247 (+)
Gene ID: HRGMv2_3690_1_2031
Type: pfam
Location: 2452311 - 2452727 (+)
Type: pfam
Location: 2452311 - 2452727 (+)
Gene ID: HRGMv2_3690_1_2032
Type: pfam
Location: 2452896 - 2453576 (-)
Type: pfam
Location: 2452896 - 2453576 (-)
Gene ID: HRGMv2_3690_1_2033
Type: CAZyme
Location: 2453590 - 2455341 (-)
Type: CAZyme
Location: 2453590 - 2455341 (-)
Gene ID: HRGMv2_3690_1_2034
Type: CAZyme
Location: 2455359 - 2456948 (-)
Type: CAZyme
Location: 2455359 - 2456948 (-)
Gene ID: HRGMv2_3690_1_2035
Type: TC
Location: 2456945 - 2457532 (-)
Type: TC
Location: 2456945 - 2457532 (-)
Gene ID: HRGMv2_3690_1_2036
Type: TC
Location: 2458059 - 2458859 (+)
Type: TC
Location: 2458059 - 2458859 (+)
Gene ID: HRGMv2_3690_1_2037
Type: TC
Location: 2459044 - 2459859 (+)
Type: TC
Location: 2459044 - 2459859 (+)
Gene ID: HRGMv2_3690_1_2038
Type:
Location: 2459967 - 2460203 (+)
Type:
Location: 2459967 - 2460203 (+)
Gene ID: HRGMv2_3690_1_2039
Type: TC
Location: 2460683 - 2461426 (+)
Type: TC
Location: 2460683 - 2461426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister succinatiphilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3690_1_2028 | vegetarian > omnivore | 5.42679 | 0.00565 |
| HRGMv2_3690_1_2028 | vegetarian > vegan | 19.00463 | 0.00565 |
| HRGMv2_3690_1_2029 | vegetarian > omnivore | 18.86609 | 0.00565 |
| HRGMv2_3690_1_2029 | vegetarian > vegan | 18.86609 | 0.00565 |
| HRGMv2_3690_1_2030 | vegan > omnivore | 2.07585 | 0.01271 |
| HRGMv2_3690_1_2031 | vegetarian > vegan | 2.00961 | 0.00565 |
| HRGMv2_3690_1_2031 | vegetarian > omnivore | 2.08905 | 0.00565 |
| HRGMv2_3690_1_2032 | vegetarian > omnivore | 2.10362 | 0.00565 |
| HRGMv2_3690_1_2032 | vegetarian > vegan | 4.06927 | 0.00565 |
| HRGMv2_3690_1_2033 | vegetarian > omnivore | 1.59123 | 0.00565 |
| HRGMv2_3690_1_2033 | vegetarian > vegan | 1.95648 | 0.00565 |
| HRGMv2_3690_1_2034 | vegetarian > omnivore | 1.94563 | 0.00565 |
| HRGMv2_3690_1_2034 | vegetarian > vegan | 2.53100 | 0.00565 |
| HRGMv2_3690_1_2035 | vegetarian > vegan | 1.54930 | 0.00565 |
| HRGMv2_3690_1_2036 | vegetarian > vegan | 1.04589 | 0.00565 |
| HRGMv2_3690_1_2037 | vegetarian > omnivore | 1.67741 | 0.00565 |
| HRGMv2_3690_1_2037 | vegetarian > vegan | 1.36192 | 0.00565 |
| HRGMv2_3690_1_2038 | vegetarian > vegan | 5.91949 | 0.00565 |