Cluster: HRGMv2_3690_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3690
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3690_1 | HRGMv2_3690_1_556 | 652319 | 653437 | - | GT28 |
| pfam | HRGMv2_3690_1 | HRGMv2_3690_1_557 | 653449 | 654798 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3690_1 | HRGMv2_3690_1_558 | 654871 | 655836 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3690_1_556
Type: CAZyme
Location: 652319 - 653437 (-)
Type: CAZyme
Location: 652319 - 653437 (-)
Gene ID: HRGMv2_3690_1_557
Type: pfam
Location: 653449 - 654798 (-)
Type: pfam
Location: 653449 - 654798 (-)
Gene ID: HRGMv2_3690_1_558
Type: TC
Location: 654871 - 655836 (-)
Type: TC
Location: 654871 - 655836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Species
Dialister succinatiphilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3690_1_556 | vegetarian > vegan | 1.01837 | 0.00565 |
| HRGMv2_3690_1_557 | vegan > omnivore | 3.25196 | 0.01271 |
| HRGMv2_3690_1_557 | vegetarian > omnivore | 4.66871 | 0.00565 |
| HRGMv2_3690_1_557 | vegetarian > vegan | 1.41675 | 0.00565 |
| HRGMv2_3690_1_558 | vegan > omnivore | 2.64483 | 0.01271 |
| HRGMv2_3690_1_558 | vegetarian > omnivore | 2.56251 | 0.00565 |