Cluster: HRGMv2_3686_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3686
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3686_31 | HRGMv2_3686_31_2 | 1842 | 2798 | - | GT2 |
| TC | HRGMv2_3686_31 | HRGMv2_3686_31_3 | 3175 | 6252 | - | 2.A.6.2.17 |
| TC | HRGMv2_3686_31 | HRGMv2_3686_31_4 | 6249 | 7313 | - | 2.A.6.2.27 |
| STP | HRGMv2_3686_31 | HRGMv2_3686_31_5 | 7550 | 8098 | - | TetR_N |
| NULL(UNKNOWN) | HRGMv2_3686_31 | HRGMv2_3686_31_6 | 8467 | 8862 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3686_31 | HRGMv2_3686_31_7 | 8865 | 12530 | - | 1.C.75.1.2 |
Gene ID: HRGMv2_3686_31_2
Type: CAZyme
Location: 1842 - 2798 (-)
Type: CAZyme
Location: 1842 - 2798 (-)
Gene ID: HRGMv2_3686_31_3
Type: TC
Location: 3175 - 6252 (-)
Type: TC
Location: 3175 - 6252 (-)
Gene ID: HRGMv2_3686_31_4
Type: TC
Location: 6249 - 7313 (-)
Type: TC
Location: 6249 - 7313 (-)
Gene ID: HRGMv2_3686_31_5
Type: STP
Location: 7550 - 8098 (-)
Type: STP
Location: 7550 - 8098 (-)
Gene ID: HRGMv2_3686_31_6
Type:
Location: 8467 - 8862 (-)
Type:
Location: 8467 - 8862 (-)
Gene ID: HRGMv2_3686_31_7
Type: TC
Location: 8865 - 12530 (-)
Type: TC
Location: 8865 - 12530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3686_31_2 | vegan > omnivore | 2.19259 | 0.04185 |
| HRGMv2_3686_31_2 | vegetarian > omnivore | 4.94905 | 0.03451 |