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Cluster: HRGMv2_3685_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3685_23 HRGMv2_3685_23_2 1562 3412 + GT2
NULL(UNKNOWN) HRGMv2_3685_23 HRGMv2_3685_23_3 3409 5271 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3685_23 HRGMv2_3685_23_4 5474 6460 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3685_23 HRGMv2_3685_23_5 6533 8371 + CE4
pfam HRGMv2_3685_23 HRGMv2_3685_23_6 8969 10132 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC HRGMv2_3685_23 HRGMv2_3685_23_7 10640 12013 + 2.A.22.5.3
TC HRGMv2_3685_23 HRGMv2_3685_23_8 13051 13956 + 2.A.7.3.12
TC HRGMv2_3685_23 HRGMv2_3685_23_9 14547 16037 + 2.A.35.2.1
Gene ID: HRGMv2_3685_23_2
Type: CAZyme
Location: 1562 - 3412 (+)
Gene ID: HRGMv2_3685_23_3
Type:
Location: 3409 - 5271 (+)
Gene ID: HRGMv2_3685_23_4
Type:
Location: 5474 - 6460 (+)
Gene ID: HRGMv2_3685_23_5
Type: CAZyme
Location: 6533 - 8371 (+)
Gene ID: HRGMv2_3685_23_6
Type: pfam
Location: 8969 - 10132 (+)
Gene ID: HRGMv2_3685_23_7
Type: TC
Location: 10640 - 12013 (+)
Gene ID: HRGMv2_3685_23_8
Type: TC
Location: 13051 - 13956 (+)
Gene ID: HRGMv2_3685_23_9
Type: TC
Location: 14547 - 16037 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Dialisteraceae
→
Genus
Dialister
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3685_23_6 vegetarian > omnivore 2.97451 0.02248

🧭 Explore Read Mapping of CGC

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