Cluster: HRGMv2_3685_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3685
- CGC Family ID: CGCFAM_00340
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3685_10 | HRGMv2_3685_10_1 | 199 | 1362 | + | 2.A.1.46.5 |
| TC | HRGMv2_3685_10 | HRGMv2_3685_10_2 | 1566 | 2822 | + | 2.A.23.4.1 |
| pfam | HRGMv2_3685_10 | HRGMv2_3685_10_3 | 3411 | 4232 | + | LpxI_C | LpxI_N |
| CAZyme | HRGMv2_3685_10 | HRGMv2_3685_10_4 | 5173 | 6318 | + | GT19 |
| TC | HRGMv2_3685_10 | HRGMv2_3685_10_5 | 6556 | 8319 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_3685_10 | HRGMv2_3685_10_6 | 8694 | 10022 | + | GT30 |
Gene ID: HRGMv2_3685_10_1
Type: TC
Location: 199 - 1362 (+)
Type: TC
Location: 199 - 1362 (+)
Gene ID: HRGMv2_3685_10_2
Type: TC
Location: 1566 - 2822 (+)
Type: TC
Location: 1566 - 2822 (+)
Gene ID: HRGMv2_3685_10_3
Type: pfam
Location: 3411 - 4232 (+)
Type: pfam
Location: 3411 - 4232 (+)
Gene ID: HRGMv2_3685_10_4
Type: CAZyme
Location: 5173 - 6318 (+)
Type: CAZyme
Location: 5173 - 6318 (+)
Gene ID: HRGMv2_3685_10_5
Type: TC
Location: 6556 - 8319 (+)
Type: TC
Location: 6556 - 8319 (+)
Gene ID: HRGMv2_3685_10_6
Type: CAZyme
Location: 8694 - 10022 (+)
Type: CAZyme
Location: 8694 - 10022 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.