Cluster: HRGMv2_3683_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3683
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3683_99 | HRGMv2_3683_99_3 | 3510 | 4463 | - | GT2 |
| pfam | HRGMv2_3683_99 | HRGMv2_3683_99_4 | 4860 | 5210 | - | Hpt |
| TC | HRGMv2_3683_99 | HRGMv2_3683_99_5 | 5441 | 7420 | - | 8.A.59.4.2 |
Gene ID: HRGMv2_3683_99_3
Type: CAZyme
Location: 3510 - 4463 (-)
Type: CAZyme
Location: 3510 - 4463 (-)
Gene ID: HRGMv2_3683_99_4
Type: pfam
Location: 4860 - 5210 (-)
Type: pfam
Location: 4860 - 5210 (-)
Gene ID: HRGMv2_3683_99_5
Type: TC
Location: 5441 - 7420 (-)
Type: TC
Location: 5441 - 7420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3683_99_3 | vegan > omnivore | 3.81507 | 0.02017 |
| HRGMv2_3683_99_3 | vegetarian > omnivore | 4.86337 | 0.01604 |