Cluster: HRGMv2_3683_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3683
- CGC Family ID: CGCFAM_00340
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3683_11 | HRGMv2_3683_11_20 | 18467 | 19795 | - | GT30 |
| TC | HRGMv2_3683_11 | HRGMv2_3683_11_21 | 20094 | 21857 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_3683_11 | HRGMv2_3683_11_22 | 22330 | 23457 | - | GT19 |
| pfam | HRGMv2_3683_11 | HRGMv2_3683_11_23 | 24094 | 24915 | - | LpxI_C | LpxI_N |
| TC | HRGMv2_3683_11 | HRGMv2_3683_11_24 | 25371 | 26627 | - | 2.A.23.4.1 |
| TC | HRGMv2_3683_11 | HRGMv2_3683_11_25 | 27110 | 27811 | - | 2.A.64.3.2 |
| TC | HRGMv2_3683_11 | HRGMv2_3683_11_26 | 27808 | 28017 | - | 2.A.64.3.1 |
Gene ID: HRGMv2_3683_11_20
Type: CAZyme
Location: 18467 - 19795 (-)
Type: CAZyme
Location: 18467 - 19795 (-)
Gene ID: HRGMv2_3683_11_21
Type: TC
Location: 20094 - 21857 (-)
Type: TC
Location: 20094 - 21857 (-)
Gene ID: HRGMv2_3683_11_22
Type: CAZyme
Location: 22330 - 23457 (-)
Type: CAZyme
Location: 22330 - 23457 (-)
Gene ID: HRGMv2_3683_11_23
Type: pfam
Location: 24094 - 24915 (-)
Type: pfam
Location: 24094 - 24915 (-)
Gene ID: HRGMv2_3683_11_24
Type: TC
Location: 25371 - 26627 (-)
Type: TC
Location: 25371 - 26627 (-)
Gene ID: HRGMv2_3683_11_25
Type: TC
Location: 27110 - 27811 (-)
Type: TC
Location: 27110 - 27811 (-)
Gene ID: HRGMv2_3683_11_26
Type: TC
Location: 27808 - 28017 (-)
Type: TC
Location: 27808 - 28017 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Dialister
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.