Cluster: HRGMv2_3674_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_10424
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_5 | HRGMv2_3674_5_24 | 24991 | 26100 | + | GT28 |
| TC | HRGMv2_3674_5 | HRGMv2_3674_5_25 | 26179 | 28923 | + | 3.A.5.1.3 |
| pfam | HRGMv2_3674_5 | HRGMv2_3674_5_26 | 28947 | 30071 | + | RF-1 | PCRF |
| pfam | HRGMv2_3674_5 | HRGMv2_3674_5_27 | 30185 | 31612 | - | Transpeptidase | PBP_dimer_2 |
| TC | HRGMv2_3674_5 | HRGMv2_3674_5_28 | 31599 | 32867 | - | 2.A.103.1.3 |
| STP | HRGMv2_3674_5 | HRGMv2_3674_5_29 | 32869 | 33318 | - | FHA |
| TC | HRGMv2_3674_5 | HRGMv2_3674_5_30 | 33335 | 34585 | - | 2.A.86.1.11 |
Gene ID: HRGMv2_3674_5_24
Type: CAZyme
Location: 24991 - 26100 (+)
Type: CAZyme
Location: 24991 - 26100 (+)
Gene ID: HRGMv2_3674_5_25
Type: TC
Location: 26179 - 28923 (+)
Type: TC
Location: 26179 - 28923 (+)
Gene ID: HRGMv2_3674_5_26
Type: pfam
Location: 28947 - 30071 (+)
Type: pfam
Location: 28947 - 30071 (+)
Gene ID: HRGMv2_3674_5_27
Type: pfam
Location: 30185 - 31612 (-)
Type: pfam
Location: 30185 - 31612 (-)
Gene ID: HRGMv2_3674_5_28
Type: TC
Location: 31599 - 32867 (-)
Type: TC
Location: 31599 - 32867 (-)
Gene ID: HRGMv2_3674_5_29
Type: STP
Location: 32869 - 33318 (-)
Type: STP
Location: 32869 - 33318 (-)
Gene ID: HRGMv2_3674_5_30
Type: TC
Location: 33335 - 34585 (-)
Type: TC
Location: 33335 - 34585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.