Cluster: HRGMv2_3674_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00592
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_4 | HRGMv2_3674_4_54 | 63856 | 67989 | + | CBM9 | GH39 |
| pfam | HRGMv2_3674_4 | HRGMv2_3674_4_55 | 68214 | 69404 | + | ANF_receptor | Peripla_BP_6 |
| TC | HRGMv2_3674_4 | HRGMv2_3674_4_56 | 69565 | 70446 | + | 3.A.1.4.10 |
| TC | HRGMv2_3674_4 | HRGMv2_3674_4_57 | 70456 | 71520 | + | 3.A.1.4.8 |
| TC | HRGMv2_3674_4 | HRGMv2_3674_4_58 | 71522 | 72352 | + | 3.A.1.4.10 |
| TC | HRGMv2_3674_4 | HRGMv2_3674_4_59 | 72356 | 73054 | + | 3.A.1.4.10 |
Gene ID: HRGMv2_3674_4_54
Type: CAZyme
Location: 63856 - 67989 (+)
Type: CAZyme
Location: 63856 - 67989 (+)
Gene ID: HRGMv2_3674_4_55
Type: pfam
Location: 68214 - 69404 (+)
Type: pfam
Location: 68214 - 69404 (+)
Gene ID: HRGMv2_3674_4_56
Type: TC
Location: 69565 - 70446 (+)
Type: TC
Location: 69565 - 70446 (+)
Gene ID: HRGMv2_3674_4_57
Type: TC
Location: 70456 - 71520 (+)
Type: TC
Location: 70456 - 71520 (+)
Gene ID: HRGMv2_3674_4_58
Type: TC
Location: 71522 - 72352 (+)
Type: TC
Location: 71522 - 72352 (+)
Gene ID: HRGMv2_3674_4_59
Type: TC
Location: 72356 - 73054 (+)
Type: TC
Location: 72356 - 73054 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.