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Cluster: HRGMv2_3674_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3674_3 HRGMv2_3674_3_53 94317 95432 - GH88
TC HRGMv2_3674_3 HRGMv2_3674_3_54 95839 96447 + 3.A.1.25.5
TC HRGMv2_3674_3 HRGMv2_3674_3_55 96513 97832 - 2.A.66.1.37
pfam HRGMv2_3674_3 HRGMv2_3674_3_56 97939 98358 - ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_3674_3 HRGMv2_3674_3_57 98380 99771 - 3.A.2.1.5
TC HRGMv2_3674_3 HRGMv2_3674_3_58 99764 100684 - 3.A.2.1.5
TC HRGMv2_3674_3 HRGMv2_3674_3_59 100702 102729 - 3.A.2.1.5
pfam HRGMv2_3674_3 HRGMv2_3674_3_60 102731 103225 - ATP-synt_B
pfam HRGMv2_3674_3 HRGMv2_3674_3_61 103254 103478 - ATP-synt_C
TC HRGMv2_3674_3 HRGMv2_3674_3_62 103502 104179 - 3.A.2.1.5
Gene ID: HRGMv2_3674_3_53
Type: CAZyme
Location: 94317 - 95432 (-)
Gene ID: HRGMv2_3674_3_54
Type: TC
Location: 95839 - 96447 (+)
Gene ID: HRGMv2_3674_3_55
Type: TC
Location: 96513 - 97832 (-)
Gene ID: HRGMv2_3674_3_56
Type: pfam
Location: 97939 - 98358 (-)
Gene ID: HRGMv2_3674_3_57
Type: TC
Location: 98380 - 99771 (-)
Gene ID: HRGMv2_3674_3_58
Type: TC
Location: 99764 - 100684 (-)
Gene ID: HRGMv2_3674_3_59
Type: TC
Location: 100702 - 102729 (-)
Gene ID: HRGMv2_3674_3_60
Type: pfam
Location: 102731 - 103225 (-)
Gene ID: HRGMv2_3674_3_61
Type: pfam
Location: 103254 - 103478 (-)
Gene ID: HRGMv2_3674_3_62
Type: TC
Location: 103502 - 104179 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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