Cluster: HRGMv2_3674_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3674
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_3 | HRGMv2_3674_3_33 | 55005 | 56279 | - | GH1 |
| TC | HRGMv2_3674_3 | HRGMv2_3674_3_34 | 56285 | 57775 | - | 3.A.1.1.9 |
| TC | HRGMv2_3674_3 | HRGMv2_3674_3_35 | 57826 | 58713 | - | 3.A.1.1.29 |
| TC | HRGMv2_3674_3 | HRGMv2_3674_3_36 | 58723 | 59661 | - | 3.A.1.1.10 |
| pfam | HRGMv2_3674_3 | HRGMv2_3674_3_37 | 60046 | 61710 | - | ADP_ribosyl_GH |
| CAZyme | HRGMv2_3674_3 | HRGMv2_3674_3_38 | 61707 | 63878 | - | GH95 |
| TC | HRGMv2_3674_3 | HRGMv2_3674_3_39 | 63890 | 65455 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_3674_3 | HRGMv2_3674_3_40 | 65474 | 67855 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3674_3 | HRGMv2_3674_3_41 | 67874 | 70702 | - | Laminin_G_3 | Big_7 |
| CAZyme | HRGMv2_3674_3 | HRGMv2_3674_3_42 | 70743 | 74444 | - | PL35 |
| CAZyme | HRGMv2_3674_3 | HRGMv2_3674_3_43 | 74432 | 76984 | - | CBM32 | PL35 |
Gene ID: HRGMv2_3674_3_33
Type: CAZyme
Location: 55005 - 56279 (-)
Type: CAZyme
Location: 55005 - 56279 (-)
Gene ID: HRGMv2_3674_3_34
Type: TC
Location: 56285 - 57775 (-)
Type: TC
Location: 56285 - 57775 (-)
Gene ID: HRGMv2_3674_3_35
Type: TC
Location: 57826 - 58713 (-)
Type: TC
Location: 57826 - 58713 (-)
Gene ID: HRGMv2_3674_3_36
Type: TC
Location: 58723 - 59661 (-)
Type: TC
Location: 58723 - 59661 (-)
Gene ID: HRGMv2_3674_3_37
Type: pfam
Location: 60046 - 61710 (-)
Type: pfam
Location: 60046 - 61710 (-)
Gene ID: HRGMv2_3674_3_38
Type: CAZyme
Location: 61707 - 63878 (-)
Type: CAZyme
Location: 61707 - 63878 (-)
Gene ID: HRGMv2_3674_3_39
Type: TC
Location: 63890 - 65455 (-)
Type: TC
Location: 63890 - 65455 (-)
Gene ID: HRGMv2_3674_3_40
Type:
Location: 65474 - 67855 (-)
Type:
Location: 65474 - 67855 (-)
Gene ID: HRGMv2_3674_3_41
Type: pfam
Location: 67874 - 70702 (-)
Type: pfam
Location: 67874 - 70702 (-)
Gene ID: HRGMv2_3674_3_42
Type: CAZyme
Location: 70743 - 74444 (-)
Type: CAZyme
Location: 70743 - 74444 (-)
Gene ID: HRGMv2_3674_3_43
Type: CAZyme
Location: 74432 - 76984 (-)
Type: CAZyme
Location: 74432 - 76984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.