Cluster: HRGMv2_3674_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_10423
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3674_52 | HRGMv2_3674_52_3 | 3177 | 4517 | - | 2.A.22.5.3 |
| NULL(UNKNOWN) | HRGMv2_3674_52 | HRGMv2_3674_52_4 | 4640 | 5353 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3674_52 | HRGMv2_3674_52_5 | 5910 | 6485 | - | Acetyltransf_1 | YoaP |
| CAZyme | HRGMv2_3674_52 | HRGMv2_3674_52_6 | 6523 | 8715 | - | GH36 |
| pfam | HRGMv2_3674_52 | HRGMv2_3674_52_7 | 8789 | 9427 | - | UPF0029 | DUF1949 |
| TC | HRGMv2_3674_52 | HRGMv2_3674_52_8 | 9635 | 10057 | - | 1.A.62.2.1 |
Gene ID: HRGMv2_3674_52_3
Type: TC
Location: 3177 - 4517 (-)
Type: TC
Location: 3177 - 4517 (-)
Gene ID: HRGMv2_3674_52_4
Type:
Location: 4640 - 5353 (-)
Type:
Location: 4640 - 5353 (-)
Gene ID: HRGMv2_3674_52_5
Type: pfam
Location: 5910 - 6485 (-)
Type: pfam
Location: 5910 - 6485 (-)
Gene ID: HRGMv2_3674_52_6
Type: CAZyme
Location: 6523 - 8715 (-)
Type: CAZyme
Location: 6523 - 8715 (-)
Gene ID: HRGMv2_3674_52_7
Type: pfam
Location: 8789 - 9427 (-)
Type: pfam
Location: 8789 - 9427 (-)
Gene ID: HRGMv2_3674_52_8
Type: TC
Location: 9635 - 10057 (-)
Type: TC
Location: 9635 - 10057 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.