Cluster: HRGMv2_3674_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00629
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_48 | HRGMv2_3674_48_9 | 8073 | 11072 | - | GH38 |
| TF | HRGMv2_3674_48 | HRGMv2_3674_48_10 | 11177 | 12100 | - | HTH_AraC |
| TC | HRGMv2_3674_48 | HRGMv2_3674_48_11 | 12113 | 15229 | - | 2.A.6.3.6 |
| pfam | HRGMv2_3674_48 | HRGMv2_3674_48_12 | 15248 | 16612 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| pfam | HRGMv2_3674_48 | HRGMv2_3674_48_13 | 16630 | 17859 | - | OEP | OEP |
| TC | HRGMv2_3674_48 | HRGMv2_3674_48_14 | 17881 | 18798 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_3674_48_9
Type: CAZyme
Location: 8073 - 11072 (-)
Type: CAZyme
Location: 8073 - 11072 (-)
Gene ID: HRGMv2_3674_48_10
Type: TF
Location: 11177 - 12100 (-)
Type: TF
Location: 11177 - 12100 (-)
Gene ID: HRGMv2_3674_48_11
Type: TC
Location: 12113 - 15229 (-)
Type: TC
Location: 12113 - 15229 (-)
Gene ID: HRGMv2_3674_48_12
Type: pfam
Location: 15248 - 16612 (-)
Type: pfam
Location: 15248 - 16612 (-)
Gene ID: HRGMv2_3674_48_13
Type: pfam
Location: 16630 - 17859 (-)
Type: pfam
Location: 16630 - 17859 (-)
Gene ID: HRGMv2_3674_48_14
Type: TC
Location: 17881 - 18798 (-)
Type: TC
Location: 17881 - 18798 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.