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Cluster: HRGMv2_3674_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3674_47 HRGMv2_3674_47_2 77 1144 - GH105
NULL(UNKNOWN) HRGMv2_3674_47 HRGMv2_3674_47_3 1208 4462 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3674_47 HRGMv2_3674_47_4 4486 6861 - Big_7
CAZyme HRGMv2_3674_47 HRGMv2_3674_47_5 6872 11149 - PL35
NULL(UNKNOWN) HRGMv2_3674_47 HRGMv2_3674_47_6 11165 13753 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3674_47 HRGMv2_3674_47_7 13773 15368 - SLH | SLH | SLH
TC HRGMv2_3674_47 HRGMv2_3674_47_8 15381 16928 - 3.A.1.1.10
TC HRGMv2_3674_47 HRGMv2_3674_47_9 16948 17823 - 3.A.1.1.29
TC HRGMv2_3674_47 HRGMv2_3674_47_10 17858 18793 - 3.A.1.1.10
Gene ID: HRGMv2_3674_47_2
Type: CAZyme
Location: 77 - 1144 (-)
Gene ID: HRGMv2_3674_47_3
Type:
Location: 1208 - 4462 (-)
Gene ID: HRGMv2_3674_47_4
Type: pfam
Location: 4486 - 6861 (-)
Gene ID: HRGMv2_3674_47_5
Type: CAZyme
Location: 6872 - 11149 (-)
Gene ID: HRGMv2_3674_47_6
Type:
Location: 11165 - 13753 (-)
Gene ID: HRGMv2_3674_47_7
Type: pfam
Location: 13773 - 15368 (-)
Gene ID: HRGMv2_3674_47_8
Type: TC
Location: 15381 - 16928 (-)
Gene ID: HRGMv2_3674_47_9
Type: TC
Location: 16948 - 17823 (-)
Gene ID: HRGMv2_3674_47_10
Type: TC
Location: 17858 - 18793 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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