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Cluster: HRGMv2_3674_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3674_36 HRGMv2_3674_36_2 1509 2219 - 3.A.1.24.5
TC HRGMv2_3674_36 HRGMv2_3674_36_3 2212 3222 - 3.A.1.24.2
TC HRGMv2_3674_36 HRGMv2_3674_36_4 3327 4181 - 3.A.1.24.5
TF HRGMv2_3674_36 HRGMv2_3674_36_5 4277 5203 - HTH_1
NULL(UNKNOWN) HRGMv2_3674_36 HRGMv2_3674_36_6 5399 6061 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3674_36 HRGMv2_3674_36_7 6092 8728 + 3.A.9.1.2
NULL(UNKNOWN) HRGMv2_3674_36 HRGMv2_3674_36_8 8980 9600 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3674_36 HRGMv2_3674_36_9 9612 10475 - HTH_AraC
CAZyme HRGMv2_3674_36 HRGMv2_3674_36_10 10611 11309 + CE14
Gene ID: HRGMv2_3674_36_2
Type: TC
Location: 1509 - 2219 (-)
Gene ID: HRGMv2_3674_36_3
Type: TC
Location: 2212 - 3222 (-)
Gene ID: HRGMv2_3674_36_4
Type: TC
Location: 3327 - 4181 (-)
Gene ID: HRGMv2_3674_36_5
Type: TF
Location: 4277 - 5203 (-)
Gene ID: HRGMv2_3674_36_6
Type:
Location: 5399 - 6061 (+)
Gene ID: HRGMv2_3674_36_7
Type: TC
Location: 6092 - 8728 (+)
Gene ID: HRGMv2_3674_36_8
Type:
Location: 8980 - 9600 (-)
Gene ID: HRGMv2_3674_36_9
Type: TF
Location: 9612 - 10475 (-)
Gene ID: HRGMv2_3674_36_10
Type: CAZyme
Location: 10611 - 11309 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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