Cluster: HRGMv2_3674_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00141
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_35 | HRGMv2_3674_35_9 | 19005 | 21167 | - | GH105 |
| TC | HRGMv2_3674_35 | HRGMv2_3674_35_10 | 21180 | 22055 | - | 3.A.1.1.10 |
| TC | HRGMv2_3674_35 | HRGMv2_3674_35_11 | 22086 | 23024 | - | 3.A.1.1.10 |
| TC | HRGMv2_3674_35 | HRGMv2_3674_35_12 | 23045 | 24631 | - | 3.A.1.1.10 |
| TF | HRGMv2_3674_35 | HRGMv2_3674_35_13 | 24753 | 26954 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3674_35 | HRGMv2_3674_35_14 | 27169 | 29028 | - | GH78 |
Gene ID: HRGMv2_3674_35_9
Type: CAZyme
Location: 19005 - 21167 (-)
Type: CAZyme
Location: 19005 - 21167 (-)
Gene ID: HRGMv2_3674_35_10
Type: TC
Location: 21180 - 22055 (-)
Type: TC
Location: 21180 - 22055 (-)
Gene ID: HRGMv2_3674_35_11
Type: TC
Location: 22086 - 23024 (-)
Type: TC
Location: 22086 - 23024 (-)
Gene ID: HRGMv2_3674_35_12
Type: TC
Location: 23045 - 24631 (-)
Type: TC
Location: 23045 - 24631 (-)
Gene ID: HRGMv2_3674_35_13
Type: TF
Location: 24753 - 26954 (-)
Type: TF
Location: 24753 - 26954 (-)
Gene ID: HRGMv2_3674_35_14
Type: CAZyme
Location: 27169 - 29028 (-)
Type: CAZyme
Location: 27169 - 29028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.