Cluster: HRGMv2_3674_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00285
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3674_33 | HRGMv2_3674_33_2 | 1495 | 2445 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_33 | HRGMv2_3674_33_3 | 2471 | 3331 | + | 3.A.1.1.29 |
| TC | HRGMv2_3674_33 | HRGMv2_3674_33_4 | 3366 | 4937 | + | 3.A.1.1.10 |
| TF | HRGMv2_3674_33 | HRGMv2_3674_33_5 | 4980 | 7115 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3674_33 | HRGMv2_3674_33_6 | 7130 | 11269 | + | PL8 |
Gene ID: HRGMv2_3674_33_2
Type: TC
Location: 1495 - 2445 (+)
Type: TC
Location: 1495 - 2445 (+)
Gene ID: HRGMv2_3674_33_3
Type: TC
Location: 2471 - 3331 (+)
Type: TC
Location: 2471 - 3331 (+)
Gene ID: HRGMv2_3674_33_4
Type: TC
Location: 3366 - 4937 (+)
Type: TC
Location: 3366 - 4937 (+)
Gene ID: HRGMv2_3674_33_5
Type: TF
Location: 4980 - 7115 (+)
Type: TF
Location: 4980 - 7115 (+)
Gene ID: HRGMv2_3674_33_6
Type: CAZyme
Location: 7130 - 11269 (+)
Type: CAZyme
Location: 7130 - 11269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.