Cluster: HRGMv2_3674_CGC25
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3674
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_24 | HRGMv2_3674_24_22 | 22694 | 23830 | + | GH88 |
| NULL(UNKNOWN) | HRGMv2_3674_24 | HRGMv2_3674_24_23 | 23842 | 25197 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3674_24 | HRGMv2_3674_24_24 | 25203 | 26795 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_24 | HRGMv2_3674_24_25 | 26825 | 27775 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_24 | HRGMv2_3674_24_26 | 27788 | 28669 | + | 3.A.1.1.29 |
| CAZyme | HRGMv2_3674_24 | HRGMv2_3674_24_27 | 28747 | 30987 | + | PL35 |
| pfam | HRGMv2_3674_24 | HRGMv2_3674_24_28 | 31002 | 31418 | + | Imp-YgjV |
| NULL(UNKNOWN) | HRGMv2_3674_24 | HRGMv2_3674_24_29 | 31444 | 31572 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3674_24 | HRGMv2_3674_24_30 | 31559 | 32479 | + | GH43_26 |
| pfam | HRGMv2_3674_24 | HRGMv2_3674_24_31 | 32482 | 33768 | + | FAD_binding_2 | Thi4 | FAD_oxidored | NAD_binding_8 |
| CAZyme | HRGMv2_3674_24 | HRGMv2_3674_24_32 | 33849 | 38135 | + | PL35 |
Gene ID: HRGMv2_3674_24_22
Type: CAZyme
Location: 22694 - 23830 (+)
Type: CAZyme
Location: 22694 - 23830 (+)
Gene ID: HRGMv2_3674_24_23
Type:
Location: 23842 - 25197 (+)
Type:
Location: 23842 - 25197 (+)
Gene ID: HRGMv2_3674_24_24
Type: TC
Location: 25203 - 26795 (+)
Type: TC
Location: 25203 - 26795 (+)
Gene ID: HRGMv2_3674_24_25
Type: TC
Location: 26825 - 27775 (+)
Type: TC
Location: 26825 - 27775 (+)
Gene ID: HRGMv2_3674_24_26
Type: TC
Location: 27788 - 28669 (+)
Type: TC
Location: 27788 - 28669 (+)
Gene ID: HRGMv2_3674_24_27
Type: CAZyme
Location: 28747 - 30987 (+)
Type: CAZyme
Location: 28747 - 30987 (+)
Gene ID: HRGMv2_3674_24_28
Type: pfam
Location: 31002 - 31418 (+)
Type: pfam
Location: 31002 - 31418 (+)
Gene ID: HRGMv2_3674_24_29
Type:
Location: 31444 - 31572 (+)
Type:
Location: 31444 - 31572 (+)
Gene ID: HRGMv2_3674_24_30
Type: CAZyme
Location: 31559 - 32479 (+)
Type: CAZyme
Location: 31559 - 32479 (+)
Gene ID: HRGMv2_3674_24_31
Type: pfam
Location: 32482 - 33768 (+)
Type: pfam
Location: 32482 - 33768 (+)
Gene ID: HRGMv2_3674_24_32
Type: CAZyme
Location: 33849 - 38135 (+)
Type: CAZyme
Location: 33849 - 38135 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.