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Cluster: HRGMv2_3674_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3674_23 HRGMv2_3674_23_3 3291 4841 + 3.A.1.1.9
CAZyme HRGMv2_3674_23 HRGMv2_3674_23_4 4866 8249 + GH141
TF HRGMv2_3674_23 HRGMv2_3674_23_5 8295 9479 + HTH_AraC | HTH_AraC
pfam HRGMv2_3674_23 HRGMv2_3674_23_6 9543 10484 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_3674_23 HRGMv2_3674_23_7 10477 11520 + CE15
sulfatase HRGMv2_3674_23 HRGMv2_3674_23_8 11741 14251 + S1_2
pfam HRGMv2_3674_23 HRGMv2_3674_23_9 14267 14854 + CoaE
CAZyme HRGMv2_3674_23 HRGMv2_3674_23_10 14847 15410 + GH23
Gene ID: HRGMv2_3674_23_3
Type: TC
Location: 3291 - 4841 (+)
Gene ID: HRGMv2_3674_23_4
Type: CAZyme
Location: 4866 - 8249 (+)
Gene ID: HRGMv2_3674_23_5
Type: TF
Location: 8295 - 9479 (+)
Gene ID: HRGMv2_3674_23_6
Type: pfam
Location: 9543 - 10484 (+)
Gene ID: HRGMv2_3674_23_7
Type: CAZyme
Location: 10477 - 11520 (+)
Gene ID: HRGMv2_3674_23_8
Type: sulfatase
Location: 11741 - 14251 (+)
Gene ID: HRGMv2_3674_23_9
Type: pfam
Location: 14267 - 14854 (+)
Gene ID: HRGMv2_3674_23_10
Type: CAZyme
Location: 14847 - 15410 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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