Cluster: HRGMv2_3674_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_09212
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3674_20 | HRGMv2_3674_20_18 | 27069 | 28802 | + | 9.B.33.1.1 |
| TC | HRGMv2_3674_20 | HRGMv2_3674_20_19 | 29034 | 29981 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_20 | HRGMv2_3674_20_20 | 29981 | 30874 | + | 3.A.1.1.10 |
| pfam | HRGMv2_3674_20 | HRGMv2_3674_20_21 | 30897 | 34925 | + | SLH | SLH | SLH | Big_5 |
| pfam | HRGMv2_3674_20 | HRGMv2_3674_20_22 | 34922 | 37936 | + | SLH | SLH |
| CAZyme | HRGMv2_3674_20 | HRGMv2_3674_20_23 | 37942 | 39807 | + | GH141 |
Gene ID: HRGMv2_3674_20_18
Type: TC
Location: 27069 - 28802 (+)
Type: TC
Location: 27069 - 28802 (+)
Gene ID: HRGMv2_3674_20_19
Type: TC
Location: 29034 - 29981 (+)
Type: TC
Location: 29034 - 29981 (+)
Gene ID: HRGMv2_3674_20_20
Type: TC
Location: 29981 - 30874 (+)
Type: TC
Location: 29981 - 30874 (+)
Gene ID: HRGMv2_3674_20_21
Type: pfam
Location: 30897 - 34925 (+)
Type: pfam
Location: 30897 - 34925 (+)
Gene ID: HRGMv2_3674_20_22
Type: pfam
Location: 34922 - 37936 (+)
Type: pfam
Location: 34922 - 37936 (+)
Gene ID: HRGMv2_3674_20_23
Type: CAZyme
Location: 37942 - 39807 (+)
Type: CAZyme
Location: 37942 - 39807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.