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Cluster: HRGMv2_3674_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3674_17 HRGMv2_3674_17_14 13880 16363 + 9.A.8.1.9
pfam HRGMv2_3674_17 HRGMv2_3674_17_15 16399 16572 + FeoB_associated
pfam HRGMv2_3674_17 HRGMv2_3674_17_16 16651 16941 + DUF2325
CAZyme HRGMv2_3674_17 HRGMv2_3674_17_17 17091 19058 + GH36
CAZyme HRGMv2_3674_17 HRGMv2_3674_17_18 19240 20706 + GH28
CAZyme HRGMv2_3674_17 HRGMv2_3674_17_19 20807 22987 + GH3
pfam HRGMv2_3674_17 HRGMv2_3674_17_20 23030 24487 + SBP_bac_1
CAZyme HRGMv2_3674_17 HRGMv2_3674_17_21 24484 26706 + GH141
Gene ID: HRGMv2_3674_17_14
Type: TC
Location: 13880 - 16363 (+)
Gene ID: HRGMv2_3674_17_15
Type: pfam
Location: 16399 - 16572 (+)
Gene ID: HRGMv2_3674_17_16
Type: pfam
Location: 16651 - 16941 (+)
Gene ID: HRGMv2_3674_17_17
Type: CAZyme
Location: 17091 - 19058 (+)
Gene ID: HRGMv2_3674_17_18
Type: CAZyme
Location: 19240 - 20706 (+)
Gene ID: HRGMv2_3674_17_19
Type: CAZyme
Location: 20807 - 22987 (+)
Gene ID: HRGMv2_3674_17_20
Type: pfam
Location: 23030 - 24487 (+)
Gene ID: HRGMv2_3674_17_21
Type: CAZyme
Location: 24484 - 26706 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1883
→
Family
UMGS1883
→
Genus
UMGS1883
→
Species
UMGS1883 sp905195005

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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