Cluster: HRGMv2_3674_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00058
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3674_17 | HRGMv2_3674_17_2 | 1904 | 3472 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_17 | HRGMv2_3674_17_3 | 3543 | 4487 | + | 3.A.1.1.10 |
| TC | HRGMv2_3674_17 | HRGMv2_3674_17_4 | 4498 | 5376 | + | 3.A.1.1.10 |
| pfam | HRGMv2_3674_17 | HRGMv2_3674_17_5 | 5390 | 7024 | + | SLH | SLH | SLH |
| NULL(UNKNOWN) | HRGMv2_3674_17 | HRGMv2_3674_17_6 | 7038 | 9704 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3674_17 | HRGMv2_3674_17_7 | 9723 | 10742 | + | GH105 |
Gene ID: HRGMv2_3674_17_2
Type: TC
Location: 1904 - 3472 (+)
Type: TC
Location: 1904 - 3472 (+)
Gene ID: HRGMv2_3674_17_3
Type: TC
Location: 3543 - 4487 (+)
Type: TC
Location: 3543 - 4487 (+)
Gene ID: HRGMv2_3674_17_4
Type: TC
Location: 4498 - 5376 (+)
Type: TC
Location: 4498 - 5376 (+)
Gene ID: HRGMv2_3674_17_5
Type: pfam
Location: 5390 - 7024 (+)
Type: pfam
Location: 5390 - 7024 (+)
Gene ID: HRGMv2_3674_17_6
Type:
Location: 7038 - 9704 (+)
Type:
Location: 7038 - 9704 (+)
Gene ID: HRGMv2_3674_17_7
Type: CAZyme
Location: 9723 - 10742 (+)
Type: CAZyme
Location: 9723 - 10742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.