Cluster: HRGMv2_3674_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3674
- CGC Family ID: CGCFAM_00058
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3674_1 | HRGMv2_3674_1_11 | 17454 | 21161 | - | PL35 |
| NULL(UNKNOWN) | HRGMv2_3674_1 | HRGMv2_3674_1_12 | 21179 | 23920 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3674_1 | HRGMv2_3674_1_13 | 23940 | 25646 | - | SLH | SLH | SLH |
| TC | HRGMv2_3674_1 | HRGMv2_3674_1_14 | 25702 | 26601 | - | 3.A.1.1.10 |
| TC | HRGMv2_3674_1 | HRGMv2_3674_1_15 | 26621 | 27559 | - | 3.A.1.1.10 |
| STP | HRGMv2_3674_1 | HRGMv2_3674_1_16 | 27603 | 29150 | - | SBP_bac_1 |
| CAZyme | HRGMv2_3674_1 | HRGMv2_3674_1_17 | 29168 | 30274 | - | GH105 |
Gene ID: HRGMv2_3674_1_11
Type: CAZyme
Location: 17454 - 21161 (-)
Type: CAZyme
Location: 17454 - 21161 (-)
Gene ID: HRGMv2_3674_1_12
Type:
Location: 21179 - 23920 (-)
Type:
Location: 21179 - 23920 (-)
Gene ID: HRGMv2_3674_1_13
Type: pfam
Location: 23940 - 25646 (-)
Type: pfam
Location: 23940 - 25646 (-)
Gene ID: HRGMv2_3674_1_14
Type: TC
Location: 25702 - 26601 (-)
Type: TC
Location: 25702 - 26601 (-)
Gene ID: HRGMv2_3674_1_15
Type: TC
Location: 26621 - 27559 (-)
Type: TC
Location: 26621 - 27559 (-)
Gene ID: HRGMv2_3674_1_16
Type: STP
Location: 27603 - 29150 (-)
Type: STP
Location: 27603 - 29150 (-)
Gene ID: HRGMv2_3674_1_17
Type: CAZyme
Location: 29168 - 30274 (-)
Type: CAZyme
Location: 29168 - 30274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1883
Family
UMGS1883
Genus
UMGS1883
Species
UMGS1883 sp905195005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.