Cluster: HRGMv2_3671_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3671
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3671_3 | HRGMv2_3671_3_6 | 8241 | 9464 | - | CE4 |
| pfam | HRGMv2_3671_3 | HRGMv2_3671_3_7 | 9478 | 10551 | - | ALGX |
| TC | HRGMv2_3671_3 | HRGMv2_3671_3_8 | 10563 | 11951 | - | 2.A.50.2.1 |
| pfam | HRGMv2_3671_3 | HRGMv2_3671_3_9 | 11991 | 12641 | - | Pentapeptide | Pentapeptide | Pentapeptide_3 | Pentapeptide_4 | Pentapeptide_4 | Pentapeptide_4 | Pentapeptide_4 |
| pfam | HRGMv2_3671_3 | HRGMv2_3671_3_10 | 13008 | 15731 | - | UPF0182 |
| TC | HRGMv2_3671_3 | HRGMv2_3671_3_11 | 15777 | 16685 | - | 3.A.5.1.1 |
| pfam | HRGMv2_3671_3 | HRGMv2_3671_3_12 | 16911 | 20480 | - | SMC_N | SMC_hinge | AAA_15 | AAA_23 |
| TC | HRGMv2_3671_3 | HRGMv2_3671_3_13 | 20629 | 21267 | + | 1.A.34.1.3 |
| peptidase | HRGMv2_3671_3 | HRGMv2_3671_3_14 | 21264 | 22205 | + | M50.UPB |
| TC | HRGMv2_3671_3 | HRGMv2_3671_3_15 | 22267 | 22866 | + | 9.B.156.3.1 |
| TC | HRGMv2_3671_3 | HRGMv2_3671_3_16 | 22854 | 23390 | + | 9.B.156.3.1 |
Gene ID: HRGMv2_3671_3_6
Type: CAZyme
Location: 8241 - 9464 (-)
Type: CAZyme
Location: 8241 - 9464 (-)
Gene ID: HRGMv2_3671_3_7
Type: pfam
Location: 9478 - 10551 (-)
Type: pfam
Location: 9478 - 10551 (-)
Gene ID: HRGMv2_3671_3_8
Type: TC
Location: 10563 - 11951 (-)
Type: TC
Location: 10563 - 11951 (-)
Gene ID: HRGMv2_3671_3_9
Type: pfam
Location: 11991 - 12641 (-)
Type: pfam
Location: 11991 - 12641 (-)
Gene ID: HRGMv2_3671_3_10
Type: pfam
Location: 13008 - 15731 (-)
Type: pfam
Location: 13008 - 15731 (-)
Gene ID: HRGMv2_3671_3_11
Type: TC
Location: 15777 - 16685 (-)
Type: TC
Location: 15777 - 16685 (-)
Gene ID: HRGMv2_3671_3_12
Type: pfam
Location: 16911 - 20480 (-)
Type: pfam
Location: 16911 - 20480 (-)
Gene ID: HRGMv2_3671_3_13
Type: TC
Location: 20629 - 21267 (+)
Type: TC
Location: 20629 - 21267 (+)
Gene ID: HRGMv2_3671_3_14
Type: peptidase
Location: 21264 - 22205 (+)
Type: peptidase
Location: 21264 - 22205 (+)
Gene ID: HRGMv2_3671_3_15
Type: TC
Location: 22267 - 22866 (+)
Type: TC
Location: 22267 - 22866 (+)
Gene ID: HRGMv2_3671_3_16
Type: TC
Location: 22854 - 23390 (+)
Type: TC
Location: 22854 - 23390 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1840
Family
HGM11507
Genus
HGM11507
Species
HGM11507 sp900761005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.