Cluster: HRGMv2_3670_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3670
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3670_28 | HRGMv2_3670_28_1 | 3 | 1058 | + | GH88 |
| pfam | HRGMv2_3670_28 | HRGMv2_3670_28_2 | 1132 | 1734 | + | Glyco_hydro_38C | Glyco_hydro38C2 |
| pfam | HRGMv2_3670_28 | HRGMv2_3670_28_3 | 2193 | 3464 | + | AAA_14 | DUF4143 |
| CAZyme | HRGMv2_3670_28 | HRGMv2_3670_28_4 | 4113 | 6218 | - | CE20 |
| TC | HRGMv2_3670_28 | HRGMv2_3670_28_5 | 6323 | 7966 | - | 3.A.1.1.10 |
| TC | HRGMv2_3670_28 | HRGMv2_3670_28_6 | 8009 | 8920 | - | 3.A.1.1.10 |
| TC | HRGMv2_3670_28 | HRGMv2_3670_28_7 | 8935 | 9888 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_3670_28_1
Type: CAZyme
Location: 3 - 1058 (+)
Type: CAZyme
Location: 3 - 1058 (+)
Gene ID: HRGMv2_3670_28_2
Type: pfam
Location: 1132 - 1734 (+)
Type: pfam
Location: 1132 - 1734 (+)
Gene ID: HRGMv2_3670_28_3
Type: pfam
Location: 2193 - 3464 (+)
Type: pfam
Location: 2193 - 3464 (+)
Gene ID: HRGMv2_3670_28_4
Type: CAZyme
Location: 4113 - 6218 (-)
Type: CAZyme
Location: 4113 - 6218 (-)
Gene ID: HRGMv2_3670_28_5
Type: TC
Location: 6323 - 7966 (-)
Type: TC
Location: 6323 - 7966 (-)
Gene ID: HRGMv2_3670_28_6
Type: TC
Location: 8009 - 8920 (-)
Type: TC
Location: 8009 - 8920 (-)
Gene ID: HRGMv2_3670_28_7
Type: TC
Location: 8935 - 9888 (-)
Type: TC
Location: 8935 - 9888 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.