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Cluster: HRGMv2_3670_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3670_18 HRGMv2_3670_18_1 2 2206 - 3.A.1.32.2
TC HRGMv2_3670_18 HRGMv2_3670_18_2 2179 3954 - 3.A.1.32.2
pfam HRGMv2_3670_18 HRGMv2_3670_18_3 3970 5613 - SLH | SLH
pfam HRGMv2_3670_18 HRGMv2_3670_18_4 6085 6936 - VCA0040-like
TC HRGMv2_3670_18 HRGMv2_3670_18_5 7133 7735 + 9.B.31.1.1
CAZyme HRGMv2_3670_18 HRGMv2_3670_18_6 7726 8841 + GT28
TC HRGMv2_3670_18 HRGMv2_3670_18_7 8852 9418 + 2.A.107.1.2
TF HRGMv2_3670_18 HRGMv2_3670_18_8 9453 10370 - HTH_1
TC HRGMv2_3670_18 HRGMv2_3670_18_9 10384 11100 - 9.B.120.1.4
Gene ID: HRGMv2_3670_18_1
Type: TC
Location: 2 - 2206 (-)
Gene ID: HRGMv2_3670_18_2
Type: TC
Location: 2179 - 3954 (-)
Gene ID: HRGMv2_3670_18_3
Type: pfam
Location: 3970 - 5613 (-)
Gene ID: HRGMv2_3670_18_4
Type: pfam
Location: 6085 - 6936 (-)
Gene ID: HRGMv2_3670_18_5
Type: TC
Location: 7133 - 7735 (+)
Gene ID: HRGMv2_3670_18_6
Type: CAZyme
Location: 7726 - 8841 (+)
Gene ID: HRGMv2_3670_18_7
Type: TC
Location: 8852 - 9418 (+)
Gene ID: HRGMv2_3670_18_8
Type: TF
Location: 9453 - 10370 (-)
Gene ID: HRGMv2_3670_18_9
Type: TC
Location: 10384 - 11100 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
CALGRC01
→
Species
CALGRC01 sp937959315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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