Cluster: HRGMv2_3670_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3670
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3670_14 | HRGMv2_3670_14_12 | 7807 | 9459 | - | GH123 |
| TC | HRGMv2_3670_14 | HRGMv2_3670_14_13 | 9481 | 11241 | - | 8.A.59.2.1 |
| TF | HRGMv2_3670_14 | HRGMv2_3670_14_14 | 11270 | 12811 | - | HTH_AraC |
| STP | HRGMv2_3670_14 | HRGMv2_3670_14_15 | 12789 | 13772 | - | dCache_1 |
| TC | HRGMv2_3670_14 | HRGMv2_3670_14_16 | 13976 | 14941 | + | 3.A.1.1.20 |
| TC | HRGMv2_3670_14 | HRGMv2_3670_14_17 | 14961 | 15848 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_3670_14 | HRGMv2_3670_14_18 | 15864 | 19199 | + | CBM9 |
Gene ID: HRGMv2_3670_14_12
Type: CAZyme
Location: 7807 - 9459 (-)
Type: CAZyme
Location: 7807 - 9459 (-)
Gene ID: HRGMv2_3670_14_13
Type: TC
Location: 9481 - 11241 (-)
Type: TC
Location: 9481 - 11241 (-)
Gene ID: HRGMv2_3670_14_14
Type: TF
Location: 11270 - 12811 (-)
Type: TF
Location: 11270 - 12811 (-)
Gene ID: HRGMv2_3670_14_15
Type: STP
Location: 12789 - 13772 (-)
Type: STP
Location: 12789 - 13772 (-)
Gene ID: HRGMv2_3670_14_16
Type: TC
Location: 13976 - 14941 (+)
Type: TC
Location: 13976 - 14941 (+)
Gene ID: HRGMv2_3670_14_17
Type: TC
Location: 14961 - 15848 (+)
Type: TC
Location: 14961 - 15848 (+)
Gene ID: HRGMv2_3670_14_18
Type: CAZyme
Location: 15864 - 19199 (+)
Type: CAZyme
Location: 15864 - 19199 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.