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Cluster: HRGMv2_3670_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3670_7 HRGMv2_3670_7_12 13043 14350 + GH4
pfam HRGMv2_3670_7 HRGMv2_3670_7_13 14437 15732 - FAD_binding_2 | GIDA | Pyr_redox_2 | FAD_oxidored | NAD_binding_8
CAZyme HRGMv2_3670_7 HRGMv2_3670_7_14 15729 16691 - GH130_7
pfam HRGMv2_3670_7 HRGMv2_3670_7_15 16710 19271 - FAD_oxidored | FAD_oxidored
TC HRGMv2_3670_7 HRGMv2_3670_7_16 19321 20205 - 3.A.1.1.29
TC HRGMv2_3670_7 HRGMv2_3670_7_17 20219 21175 - 3.A.1.1.10
TC HRGMv2_3670_7 HRGMv2_3670_7_18 21206 22777 - 3.A.1.1.10
CAZyme HRGMv2_3670_7 HRGMv2_3670_7_19 22887 26378 - CBM32 | PL35
Gene ID: HRGMv2_3670_7_12
Type: CAZyme
Location: 13043 - 14350 (+)
Gene ID: HRGMv2_3670_7_13
Type: pfam
Location: 14437 - 15732 (-)
Gene ID: HRGMv2_3670_7_14
Type: CAZyme
Location: 15729 - 16691 (-)
Gene ID: HRGMv2_3670_7_15
Type: pfam
Location: 16710 - 19271 (-)
Gene ID: HRGMv2_3670_7_16
Type: TC
Location: 19321 - 20205 (-)
Gene ID: HRGMv2_3670_7_17
Type: TC
Location: 20219 - 21175 (-)
Gene ID: HRGMv2_3670_7_18
Type: TC
Location: 21206 - 22777 (-)
Gene ID: HRGMv2_3670_7_19
Type: CAZyme
Location: 22887 - 26378 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
CALGRC01
→
Species
CALGRC01 sp937959315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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