Cluster: HRGMv2_3670_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3670
- CGC Family ID: CGCFAM_07710
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3670_154 | HRGMv2_3670_154_1 | 22 | 3084 | - | GH38 |
| NULL(UNKNOWN) | HRGMv2_3670_154 | HRGMv2_3670_154_2 | 3256 | 3699 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3670_154 | HRGMv2_3670_154_3 | 3791 | 4048 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3670_154 | HRGMv2_3670_154_4 | 4086 | 4490 | - | 3.A.2.1.5 |
| TC | HRGMv2_3670_154 | HRGMv2_3670_154_5 | 4496 | 5005 | - | 3.A.2.1.1 |
Gene ID: HRGMv2_3670_154_1
Type: CAZyme
Location: 22 - 3084 (-)
Type: CAZyme
Location: 22 - 3084 (-)
Gene ID: HRGMv2_3670_154_2
Type:
Location: 3256 - 3699 (+)
Type:
Location: 3256 - 3699 (+)
Gene ID: HRGMv2_3670_154_3
Type:
Location: 3791 - 4048 (+)
Type:
Location: 3791 - 4048 (+)
Gene ID: HRGMv2_3670_154_4
Type: TC
Location: 4086 - 4490 (-)
Type: TC
Location: 4086 - 4490 (-)
Gene ID: HRGMv2_3670_154_5
Type: TC
Location: 4496 - 5005 (-)
Type: TC
Location: 4496 - 5005 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.