Cluster: HRGMv2_3670_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: HRGMv2_3670
- CGC Family ID: CGCFAM_01479
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3670_130 | HRGMv2_3670_130_1 | 1 | 531 | - | 3.A.1.1.2 |
| TC | HRGMv2_3670_130 | HRGMv2_3670_130_2 | 555 | 1571 | - | 3.A.1.1.34 |
| NULL(UNKNOWN) | HRGMv2_3670_130 | HRGMv2_3670_130_3 | 1643 | 2809 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3670_130 | HRGMv2_3670_130_4 | 2841 | 4247 | - | SBP_bac_1 |
| CAZyme | HRGMv2_3670_130 | HRGMv2_3670_130_5 | 4385 | 6373 | - | GH42 |
Gene ID: HRGMv2_3670_130_1
Type: TC
Location: 1 - 531 (-)
Type: TC
Location: 1 - 531 (-)
Gene ID: HRGMv2_3670_130_2
Type: TC
Location: 555 - 1571 (-)
Type: TC
Location: 555 - 1571 (-)
Gene ID: HRGMv2_3670_130_3
Type:
Location: 1643 - 2809 (-)
Type:
Location: 1643 - 2809 (-)
Gene ID: HRGMv2_3670_130_4
Type: STP
Location: 2841 - 4247 (-)
Type: STP
Location: 2841 - 4247 (-)
Gene ID: HRGMv2_3670_130_5
Type: CAZyme
Location: 4385 - 6373 (-)
Type: CAZyme
Location: 4385 - 6373 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.