Cluster: HRGMv2_3670_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3670
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3670_71 | HRGMv2_3670_71_4 | 2798 | 3724 | + | GH3 |
| pfam | HRGMv2_3670_71 | HRGMv2_3670_71_5 | 3773 | 3988 | + | Glyco_hydro_3 |
| pfam | HRGMv2_3670_71 | HRGMv2_3670_71_6 | 4085 | 4537 | - | C_GCAxxG_C_C |
| TC | HRGMv2_3670_71 | HRGMv2_3670_71_7 | 4724 | 6997 | + | 3.A.9.1.2 |
| TC | HRGMv2_3670_71 | HRGMv2_3670_71_8 | 7073 | 8413 | - | 9.A.40.2.1 |
| CAZyme | HRGMv2_3670_71 | HRGMv2_3670_71_9 | 9286 | 10785 | + | PL33_2 |
Gene ID: HRGMv2_3670_71_4
Type: CAZyme
Location: 2798 - 3724 (+)
Type: CAZyme
Location: 2798 - 3724 (+)
Gene ID: HRGMv2_3670_71_5
Type: pfam
Location: 3773 - 3988 (+)
Type: pfam
Location: 3773 - 3988 (+)
Gene ID: HRGMv2_3670_71_6
Type: pfam
Location: 4085 - 4537 (-)
Type: pfam
Location: 4085 - 4537 (-)
Gene ID: HRGMv2_3670_71_7
Type: TC
Location: 4724 - 6997 (+)
Type: TC
Location: 4724 - 6997 (+)
Gene ID: HRGMv2_3670_71_8
Type: TC
Location: 7073 - 8413 (-)
Type: TC
Location: 7073 - 8413 (-)
Gene ID: HRGMv2_3670_71_9
Type: CAZyme
Location: 9286 - 10785 (+)
Type: CAZyme
Location: 9286 - 10785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.