Cluster: HRGMv2_3670_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3670
- CGC Family ID: CGCFAM_10290
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3670_29 | HRGMv2_3670_29_8 | 8856 | 10700 | - | 3.A.16.1.2 |
| CAZyme | HRGMv2_3670_29 | HRGMv2_3670_29_9 | 10705 | 11859 | - | CE9 |
| pfam | HRGMv2_3670_29 | HRGMv2_3670_29_10 | 12075 | 12791 | + | Glucosamine_iso |
| CAZyme | HRGMv2_3670_29 | HRGMv2_3670_29_11 | 13154 | 14149 | - | GH33 |
Gene ID: HRGMv2_3670_29_8
Type: TC
Location: 8856 - 10700 (-)
Type: TC
Location: 8856 - 10700 (-)
Gene ID: HRGMv2_3670_29_9
Type: CAZyme
Location: 10705 - 11859 (-)
Type: CAZyme
Location: 10705 - 11859 (-)
Gene ID: HRGMv2_3670_29_10
Type: pfam
Location: 12075 - 12791 (+)
Type: pfam
Location: 12075 - 12791 (+)
Gene ID: HRGMv2_3670_29_11
Type: CAZyme
Location: 13154 - 14149 (-)
Type: CAZyme
Location: 13154 - 14149 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
CALGRC01
Species
CALGRC01 sp937959315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.