Cluster: HRGMv2_3661_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3661
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3661_33 | HRGMv2_3661_33_4 | 5003 | 6313 | - | 9.A.40.2.1 |
| NULL(UNKNOWN) | HRGMv2_3661_33 | HRGMv2_3661_33_5 | 6583 | 8829 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_3661_33 | HRGMv2_3661_33_6 | 8967 | 9974 | + | MarR |
| CAZyme | HRGMv2_3661_33 | HRGMv2_3661_33_7 | 10077 | 12347 | - | GH13_45 |
| NULL(UNKNOWN) | HRGMv2_3661_33 | HRGMv2_3661_33_8 | 12347 | 13906 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3661_33 | HRGMv2_3661_33_9 | 14044 | 16629 | - | GH13_11 |
Gene ID: HRGMv2_3661_33_4
Type: TC
Location: 5003 - 6313 (-)
Type: TC
Location: 5003 - 6313 (-)
Gene ID: HRGMv2_3661_33_5
Type:
Location: 6583 - 8829 (+)
Type:
Location: 6583 - 8829 (+)
Gene ID: HRGMv2_3661_33_6
Type: TF
Location: 8967 - 9974 (+)
Type: TF
Location: 8967 - 9974 (+)
Gene ID: HRGMv2_3661_33_7
Type: CAZyme
Location: 10077 - 12347 (-)
Type: CAZyme
Location: 10077 - 12347 (-)
Gene ID: HRGMv2_3661_33_8
Type:
Location: 12347 - 13906 (-)
Type:
Location: 12347 - 13906 (-)
Gene ID: HRGMv2_3661_33_9
Type: CAZyme
Location: 14044 - 16629 (-)
Type: CAZyme
Location: 14044 - 16629 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Myxococcota
Class
Bradymonadia
Order
UBA4248
Family
UBA4248
Genus
UBA4248
Species
UBA4248 sp004554395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.