Cluster: HRGMv2_3660_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3660_4 | HRGMv2_3660_4_108 | 113486 | 115183 | + | 3.A.18.1.1 |
| CAZyme | HRGMv2_3660_4 | HRGMv2_3660_4_109 | 115239 | 116114 | - | CE4 |
| pfam | HRGMv2_3660_4 | HRGMv2_3660_4_110 | 116208 | 116627 | - | HATPase_c_2 |
| STP | HRGMv2_3660_4 | HRGMv2_3660_4_111 | 116640 | 117794 | - | Response_reg | SpoIIE |
| TC | HRGMv2_3660_4 | HRGMv2_3660_4_112 | 117831 | 121343 | - | 2.A.21.9.2 |
Gene ID: HRGMv2_3660_4_108
Type: TC
Location: 113486 - 115183 (+)
Type: TC
Location: 113486 - 115183 (+)
Gene ID: HRGMv2_3660_4_109
Type: CAZyme
Location: 115239 - 116114 (-)
Type: CAZyme
Location: 115239 - 116114 (-)
Gene ID: HRGMv2_3660_4_110
Type: pfam
Location: 116208 - 116627 (-)
Type: pfam
Location: 116208 - 116627 (-)
Gene ID: HRGMv2_3660_4_111
Type: STP
Location: 116640 - 117794 (-)
Type: STP
Location: 116640 - 117794 (-)
Gene ID: HRGMv2_3660_4_112
Type: TC
Location: 117831 - 121343 (-)
Type: TC
Location: 117831 - 121343 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.