Cluster: HRGMv2_3660_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3660_3 | HRGMv2_3660_3_161 | 164823 | 165938 | - | GT28 |
| TC | HRGMv2_3660_3 | HRGMv2_3660_3_162 | 165944 | 167047 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3660_3 | HRGMv2_3660_3_163 | 167022 | 168416 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3660_3 | HRGMv2_3660_3_164 | 168438 | 169421 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3660_3_161
Type: CAZyme
Location: 164823 - 165938 (-)
Type: CAZyme
Location: 164823 - 165938 (-)
Gene ID: HRGMv2_3660_3_162
Type: TC
Location: 165944 - 167047 (-)
Type: TC
Location: 165944 - 167047 (-)
Gene ID: HRGMv2_3660_3_163
Type: pfam
Location: 167022 - 168416 (-)
Type: pfam
Location: 167022 - 168416 (-)
Gene ID: HRGMv2_3660_3_164
Type: TC
Location: 168438 - 169421 (-)
Type: TC
Location: 168438 - 169421 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.