Cluster: HRGMv2_3660_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3660_2 | HRGMv2_3660_2_34 | 38519 | 39310 | - | CE4 |
| TF | HRGMv2_3660_2 | HRGMv2_3660_2_35 | 39447 | 39698 | - | HTH_3 |
| TC | HRGMv2_3660_2 | HRGMv2_3660_2_36 | 39969 | 41123 | - | 2.A.45.2.6 |
| pfam | HRGMv2_3660_2 | HRGMv2_3660_2_37 | 41154 | 42095 | - | Mem_trans | Mem_trans |
| TF | HRGMv2_3660_2 | HRGMv2_3660_2_38 | 42266 | 43138 | - | HTH_1 |
| TC | HRGMv2_3660_2 | HRGMv2_3660_2_39 | 43255 | 44160 | + | 2.A.7.3.47 |
Gene ID: HRGMv2_3660_2_34
Type: CAZyme
Location: 38519 - 39310 (-)
Type: CAZyme
Location: 38519 - 39310 (-)
Gene ID: HRGMv2_3660_2_35
Type: TF
Location: 39447 - 39698 (-)
Type: TF
Location: 39447 - 39698 (-)
Gene ID: HRGMv2_3660_2_36
Type: TC
Location: 39969 - 41123 (-)
Type: TC
Location: 39969 - 41123 (-)
Gene ID: HRGMv2_3660_2_37
Type: pfam
Location: 41154 - 42095 (-)
Type: pfam
Location: 41154 - 42095 (-)
Gene ID: HRGMv2_3660_2_38
Type: TF
Location: 42266 - 43138 (-)
Type: TF
Location: 42266 - 43138 (-)
Gene ID: HRGMv2_3660_2_39
Type: TC
Location: 43255 - 44160 (+)
Type: TC
Location: 43255 - 44160 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.