Cluster: HRGMv2_3660_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3660_15 | HRGMv2_3660_15_30 | 34337 | 36193 | - | 3.D.1.5.1 |
| TC | HRGMv2_3660_15 | HRGMv2_3660_15_31 | 36215 | 36703 | - | 3.D.1.6.1 |
| pfam | HRGMv2_3660_15 | HRGMv2_3660_15_32 | 37006 | 38226 | + | PFK |
| TC | HRGMv2_3660_15 | HRGMv2_3660_15_33 | 38264 | 38782 | + | 3.D.1.8.1 |
| pfam | HRGMv2_3660_15 | HRGMv2_3660_15_34 | 38889 | 39365 | - | tRNA_edit |
| CAZyme | HRGMv2_3660_15 | HRGMv2_3660_15_35 | 39596 | 40333 | + | GH25 |
Gene ID: HRGMv2_3660_15_30
Type: TC
Location: 34337 - 36193 (-)
Type: TC
Location: 34337 - 36193 (-)
Gene ID: HRGMv2_3660_15_31
Type: TC
Location: 36215 - 36703 (-)
Type: TC
Location: 36215 - 36703 (-)
Gene ID: HRGMv2_3660_15_32
Type: pfam
Location: 37006 - 38226 (+)
Type: pfam
Location: 37006 - 38226 (+)
Gene ID: HRGMv2_3660_15_33
Type: TC
Location: 38264 - 38782 (+)
Type: TC
Location: 38264 - 38782 (+)
Gene ID: HRGMv2_3660_15_34
Type: pfam
Location: 38889 - 39365 (-)
Type: pfam
Location: 38889 - 39365 (-)
Gene ID: HRGMv2_3660_15_35
Type: CAZyme
Location: 39596 - 40333 (+)
Type: CAZyme
Location: 39596 - 40333 (+)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.