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Cluster: HRGMv2_3660_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3660_11 HRGMv2_3660_11_24 20851 21753 - CE4
pfam HRGMv2_3660_11 HRGMv2_3660_11_25 21825 23645 - GDPD | GPDPase_memb
sulfatase HRGMv2_3660_11 HRGMv2_3660_11_26 23859 25679 - S1_97
TC HRGMv2_3660_11 HRGMv2_3660_11_27 25985 27652 - 3.A.1.5.39
TC HRGMv2_3660_11 HRGMv2_3660_11_28 28032 29696 - 3.A.1.5.39
TC HRGMv2_3660_11 HRGMv2_3660_11_29 29952 31631 - 3.A.1.5.38
STP HRGMv2_3660_11 HRGMv2_3660_11_30 31953 33245 - Aminotran_1_2
peptidase HRGMv2_3660_11 HRGMv2_3660_11_31 33208 34362 - M20.UPW
TC HRGMv2_3660_11 HRGMv2_3660_11_32 34443 35990 - 2.A.15.2.3
Gene ID: HRGMv2_3660_11_24
Type: CAZyme
Location: 20851 - 21753 (-)
Gene ID: HRGMv2_3660_11_25
Type: pfam
Location: 21825 - 23645 (-)
Gene ID: HRGMv2_3660_11_26
Type: sulfatase
Location: 23859 - 25679 (-)
Gene ID: HRGMv2_3660_11_27
Type: TC
Location: 25985 - 27652 (-)
Gene ID: HRGMv2_3660_11_28
Type: TC
Location: 28032 - 29696 (-)
Gene ID: HRGMv2_3660_11_29
Type: TC
Location: 29952 - 31631 (-)
Gene ID: HRGMv2_3660_11_30
Type: STP
Location: 31953 - 33245 (-)
Gene ID: HRGMv2_3660_11_31
Type: peptidase
Location: 33208 - 34362 (-)
Gene ID: HRGMv2_3660_11_32
Type: TC
Location: 34443 - 35990 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_B
→
Class
Dehalobacteriia
→
Order
UBA4068
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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