Cluster: HRGMv2_3660_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3660_8 | HRGMv2_3660_8_52 | 49519 | 51270 | - | CBM50 |
| peptidase | HRGMv2_3660_8 | HRGMv2_3660_8_53 | 51423 | 53192 | - | I04.UPW |
| STP | HRGMv2_3660_8 | HRGMv2_3660_8_54 | 53379 | 54467 | - | Peripla_BP_2 |
| TC | HRGMv2_3660_8 | HRGMv2_3660_8_55 | 54559 | 55341 | - | 3.A.1.14.11 |
| TC | HRGMv2_3660_8 | HRGMv2_3660_8_56 | 55338 | 56357 | - | 3.A.1.14.11 |
Gene ID: HRGMv2_3660_8_52
Type: CAZyme
Location: 49519 - 51270 (-)
Type: CAZyme
Location: 49519 - 51270 (-)
Gene ID: HRGMv2_3660_8_53
Type: peptidase
Location: 51423 - 53192 (-)
Type: peptidase
Location: 51423 - 53192 (-)
Gene ID: HRGMv2_3660_8_54
Type: STP
Location: 53379 - 54467 (-)
Type: STP
Location: 53379 - 54467 (-)
Gene ID: HRGMv2_3660_8_55
Type: TC
Location: 54559 - 55341 (-)
Type: TC
Location: 54559 - 55341 (-)
Gene ID: HRGMv2_3660_8_56
Type: TC
Location: 55338 - 56357 (-)
Type: TC
Location: 55338 - 56357 (-)
Taxonomic Lineage
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.